Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787229.1_cds_XP_016497259.1_1
CDS Infomation

[gene=LOC107813361] [db_xref=GeneID:107813361] [protein=ADP-ribosylation factor GTPase-activating protein AGD2-like] [protein_id=XP_016497259.1] [location=join(21..168,253..392,556..610,2767..2886,2974..3030,4652..4941,5490..5573,5649..5921,8423..8544,8893..8980,10502..10947,12214..12328)] [gbkey=CDS]
Sequence

ATGGAGAATAGACGAGGAGGAGGTCGTTTTGGAAGATCTAGACTCAAGTGTTCTTATTAT
CACAAACTTGGACACACCCGTGAAATGTGCTATTCCTTACATGGTCGTCCACCCAAAAAT
GCTTACATTGCTCAGACCGAGACTACAGCCTCGGTTGTTCAGACTGATACTTTTGTTGCT
GGTAATTCTTTTGCTTGTGTTTCCCAATCTAGTACTCTTGGACCATGGGTCATGGACTCA
GGCGCTTCTGATCACATCTCTGGTAATATATCACTTTTGTCGAATATTTCTAGTACTCTT
GGACCATGGGTCATGGACTCAGGCGCTTCTGATCACATCTCTGTTGTCTATGTTGATGAT
ATTGTTATTACTGGTAATGATCAGGATGATATTACCAATATAAAGCAGCATCTCTTCCAG
CACTTCCAAACTAAGGATCTAGGCAGATTGAAGTACTTTTTAGGTTGCAGAGCTGTTGAC
ACTCCGATGGATCCGAATTCTAAACTTCTGCTAGGACAAGTGCTAGAGTATTTTAGCCGT
AAAGTTATTTCCAGGACATTCTTTTGCTTACTCCTTCAAATTTTATCTTATTGGCAGAGC
TCCCCGTCATCTCATCCCTCCGGCGTTGATAACAATAGTAGTGTATTTGGCAGATTCCGG
ACAAGGTATAGGTCGTCATCCCTTGGAGAGGAGAATTTAGGCTGTCGTACTGTTGATCTT
CATACTTCTACTCTAAAACCTGATGCGGAGGACACAGACCTGAGGCTTTGCTTCAGAATT
ATTTCGCCGTTAAAAACTTATACATTGCAGGCTGAAAGTGAAGCTGAAAGAGTTGACTGG
ATGAATAAAATCACCGGAGTGATTGCGTCCCTTTTGAATTCTCATCTACATAAGTTTGAT
CCTAGTAAAAATGACGTTGATAGTAGCAACGGTACCTATGCTGCTTCTTTAAATGTTCAA
GGGGCTGTTAGTGGCGAAAATGCACTAGCTACCATGAGAGTCAATCAGGCCGATTCTGTT
TCTAGGATTCTCAGAGAAGTTCCTGGAAATGACACGTGTGCTGACTGTGGTGCTTTAGAA
CCTGATTGGGCATCTCTAAATCTTGGTATCTTAATTTGCATAGAATGCTCGGGAATTCAT
CGGAACCTTGGTGTTCATATCTCAAAGGTCAGGTCCATCACGTTAGATGTCAGGGTTTGG
GAGCCTACCATTTTGGATCTTTTTCGCACATTGGGTAATTCTTACTGTAACTCGGTGTGG
GAGGAGCTGCTTCTACTTCCAAGTGGCAGATCAACAAATGTTGATGCTATTCAATCTGTT
TCCAAGCCAAGCCCGAAAGATGGCTTTCATGAAAAGGAGAAGTACATTTTGGCAAAGTAT
GTTGAAAAGCAGGTTGTGAATAAAGAAGCTCTTGCACCTTACAACAACAATCGTGCCACC
GGCATCTGGGAAGCAGTTAGGAGTAATAACGTGAAGGAAGTCTATCGAATTATTGTAATG
TCAGATGTGAATATAATCAACACTACCTATGATGAGGTCAAAGGTGCTAAAATATACCAT
GAAATCCATGAAAATGATTCAAAACTAGGCTTTGATGATTCCAAAAAGAAACATCAAAAC
CCAGCAGGCTGTCAGGACATCAAGCTTTGCCGTCAAGGATGTTCTTTGTTACATCTAGCA
TGCAACGGTGACAGTCCAGTGATGCTTGAGCTTCTTCTGCAATTTGGTGCAGATATAAAT
AGGCGTGATTTTCATGGAAGGACTCCTCTACAACATTGTATCTGCATGGGGAGACACCAC
TTGGCAAAATTTTTGCTTAGAAGAGGTGCCCGTGCATCGATCAAGGATTACGGTGGACTC
AGTGTGCTGGAAAGGGCCATGGAGATGGGTGGAATCAAAGATGAGGAGTTATTTATCCTG
CTTACCAAGAGTGAGTGA

Peptide Sequence

PEP ID

XP_016497259.1
PEP Infomation

PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD2-like [Nicotiana tabacum]
Sequence

MENRRGGGRFGRSRLKCSYYHKLGHTREMCYSLHGRPPKNAYIAQTETTASVVQTDTFVA
GNSFACVSQSSTLGPWVMDSGASDHISGNISLLSNISSTLGPWVMDSGASDHISVVYVDD
IVITGNDQDDITNIKQHLFQHFQTKDLGRLKYFLGCRAVDTPMDPNSKLLLGQVLEYFSR
KVISRTFFCLLLQILSYWQSSPSSHPSGVDNNSSVFGRFRTRYRSSSLGEENLGCRTVDL
HTSTLKPDAEDTDLRLCFRIISPLKTYTLQAESEAERVDWMNKITGVIASLLNSHLHKFD
PSKNDVDSSNGTYAASLNVQGAVSGENALATMRVNQADSVSRILREVPGNDTCADCGALE
PDWASLNLGILICIECSGIHRNLGVHISKVRSITLDVRVWEPTILDLFRTLGNSYCNSVW
EELLLLPSGRSTNVDAIQSVSKPSPKDGFHEKEKYILAKYVEKQVVNKEALAPYNNNRAT
GIWEAVRSNNVKEVYRIIVMSDVNIINTTYDEVKGAKIYHEIHENDSKLGFDDSKKKHQN
PAGCQDIKLCRQGCSLLHLACNGDSPVMLELLLQFGADINRRDFHGRTPLQHCICMGRHH
LAKFLLRRGARASIKDYGGLSVLERAMEMGGIKDEELFILLTKSE

Transcript Sequence

Gene sequence data has not been registered.